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| GenBank Identifier | RefSeq Acc. | Name |
| 38640309 | NC_005262.1 | Burkholderia cepacia phage Bcep22 |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 24086 | - | 55928 | 90 | 19 | -25.1 | NP_944303 | 5' arm 3' arm | ||
| 23919 | + | 28446 | 90 | 20 | -25.3 | NP_944280 | 5' arm 3' arm | ||
| 24044 | - | 37341 | 88 | 20 | -25.4 | NP_944291 | 5' arm 3' arm | ||
| 24020 | - | 27964 | 89 | 20.5 | -25.4 | NP_944280 | 5' arm 3' arm | ||
| 24042 | - | 35602 | 89 | 21 | -25.5 | NP_944290 | 5' arm 3' arm | ||
| 23869 | + | 3648 | 90 | 22.5 | -25.6 | NP_944235 | 5' arm 3' arm | ||
| 23977 | - | 5702 | 88 | 20 | -25.6 | NP_944238 | 5' arm 3' arm | ||
| 24031 | - | 31486 | 89 | 24.5 | -25.7 | 5' arm 3' arm | |||
| 24038 | - | 33354 | 90 | 23 | -25.7 | NP_944286 | 5' arm 3' arm | ||
| 24033 | - | 31813 | 89 | 20 | -25.7 | NP_944284 | 5' arm 3' arm | ||
| 23861 | + | 1470 | 87 | 21 | -25.8 | NP_944234 | 5' arm 3' arm | ||
| 23882 | + | 7529 | 89 | 20.5 | -25.9 | NP_944241 | 5' arm 3' arm | ||
| 24098 | - | 59122 | 90 | 23.5 | -25.9 | NP_944303 | 5' arm 3' arm | ||
| 23932 | + | 37926 | 90 | 21 | -26 | NP_944291 | 5' arm 3' arm | ||
| 24027 | - | 30368 | 89 | 23 | -26.1 | NP_944281 | 5' arm 3' arm | ||
| 24105 | - | 61303 | 90 | 20 | -26.1 | NP_944303 | 5' arm 3' arm | ||
| 24109 | - | 63722 | 90 | 19.5 | -26.1 | NP_944308 | 5' arm 3' arm | ||
| 24100 | - | 59359 | 90 | 19 | -26.2 | NP_944303 | 5' arm 3' arm | ||
| 23940 | + | 41882 | 89 | 21 | -26.4 | 5' arm 3' arm | |||
| 23958 | + | 54990 | 89 | 19.5 | -26.5 | NP_944303 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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