miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
23644	+	83352	88	21.5	-24.6	NP_954935		5' arm      3' arm
23824	-	104229	88	19	-24.7	NP_954951		5' arm      3' arm
23840	-	119566	89	22.5	-24.7			5' arm      3' arm
23670	+	103420	88	19.5	-24.8	NP_954952		5' arm      3' arm
23715	-	10130	89	22	-24.8			5' arm      3' arm
23582	+	25802	90	19.5	-24.8	NP_954908		5' arm      3' arm
23586	+	28586	90	21	-24.8	NP_954909		5' arm      3' arm
23708	-	5626	90	22.5	-24.8	NP_954895		5' arm      3' arm
23794	-	81652	87	19.5	-24.8	NP_954931		5' arm      3' arm
23669	+	102875	89	21.5	-24.81	NP_954952		5' arm      3' arm
23720	-	14426	89	22.5	-25	NP_954901		5' arm      3' arm
23621	+	59935	87	20	-25.06			5' arm      3' arm
23809	-	92805	89	20	-25.1	NP_954941		5' arm      3' arm
23628	+	71392	90	23	-25.1	NP_954929
23569	+	15811	88	21.5	-25.2	NP_954902		5' arm      3' arm
23589	+	32572	90	21	-25.2	NP_954911		5' arm      3' arm
23705	-	1377	87	22	-25.2	NP_954892		5' arm      3' arm
23645	+	83695	87	20	-25.2	NP_954935		5' arm      3' arm
23700	+	129596	90	27	-25.2			5' arm      3' arm
23578	+	24034	88	20.5	-25.2	NP_954907		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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