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| GenBank Identifier | RefSeq Acc. | Name |
| 38638196 | NC_005264.1 | Psittacid herpesvirus 1 |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 24542 | + | 161069 | 87 | 21 | -22.3 | 5' arm 3' arm | |||
| 24717 | - | 133421 | 90 | 20 | -22.3 | NP_944442 | 5' arm 3' arm | ||
| 24497 | + | 123219 | 88 | 21.5 | -22.4 | NP_944441 | 5' arm 3' arm | ||
| 24755 | - | 158953 | 88 | 21.5 | -22.4 | NP_944452 | 5' arm 3' arm | ||
| 24607 | - | 59322 | 90 | 20 | -22.41 | NP_944409 | 5' arm 3' arm | ||
| 24731 | - | 140855 | 89 | 21.5 | -22.5 | NP_944447 | 5' arm 3' arm | ||
| 24381 | + | 38507 | 88 | 22 | -22.5 | NP_944400 | 5' arm 3' arm | ||
| 24357 | + | 23010 | 90 | 23 | -22.6 | NP_944390 | 5' arm 3' arm | ||
| 24337 | + | 3757 | 90 | 22.5 | -22.6 | NP_944380 | 5' arm 3' arm | ||
| 24740 | - | 146308 | 89 | 21.5 | -22.6 | NP_944450 | 5' arm 3' arm | ||
| 24424 | + | 63215 | 87 | 20.5 | -22.7 | NP_944409 | 5' arm 3' arm | ||
| 24671 | - | 105869 | 90 | 21 | -22.7 | NP_944432 | 5' arm 3' arm | ||
| 24473 | + | 106819 | 90 | 19 | -22.7 | NP_944432 | 5' arm 3' arm | ||
| 24739 | - | 145326 | 85 | 19 | -22.71 | NP_944449 | 5' arm 3' arm | ||
| 24468 | + | 103055 | 85 | 21 | -22.8 | NP_944431 | 5' arm 3' arm | ||
| 24556 | - | 13681 | 85 | 22 | -22.8 | NP_944386 | 5' arm 3' arm | ||
| 24451 | + | 88148 | 90 | 21.5 | -22.8 | NP_944420 | 5' arm 3' arm | ||
| 24405 | + | 53596 | 88 | 21.5 | -22.8 | NP_944405 | 5' arm 3' arm | ||
| 24652 | - | 93299 | 90 | 22 | -22.8 | NP_944423 | 5' arm 3' arm | ||
| 24623 | - | 75325 | 90 | 20.5 | -22.8 | NP_944414 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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