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| GenBank Identifier | RefSeq Acc. | Name |
| 14250967 | NC_002794.1 | Tupaia herpesvirus |
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| ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF |
Known viral miRNA
|
Match to own genomic region# | Target prediction with RNAhybrid |
| 10700 | + | 2432 | 89 | 19.5 | -24.5 | NP_116331 | 5' arm 3' arm | ||
| 10701 | + | 3374 | 90 | 21 | -25.3 | NP_116331 | 5' arm 3' arm | ||
| 10703 | + | 4545 | 89 | 22 | -19.7 | NP_116332 | 5' arm 3' arm | ||
| 10699 | + | 2329 | 88 | 22 | -29.7 | NP_116331 | 5' arm 3' arm | ||
| 10702 | + | 3818 | 87 | 22.5 | -30.5 | NP_116331 | 5' arm 3' arm | ||
| 10715 | + | 14599 | 86 | 26.5 | -30.9 | NP_116339 | 5' arm 3' arm | ||
| 10716 | + | 17253 | 89 | 24.5 | -35.7 | 5' arm 3' arm | |||
| 10728 | + | 42893 | 89 | 21 | -20.3 | NP_116370 | 5' arm 3' arm | ||
| 10725 | + | 39738 | 90 | 19.5 | -19.73 | NP_116368 | 5' arm 3' arm | ||
| 10723 | + | 37977 | 89 | 19.5 | -32.5 | NP_116367 | 5' arm 3' arm | ||
| 10724 | + | 38745 | 88 | 20.5 | -22.2 | 5' arm 3' arm | |||
| 10722 | + | 36243 | 89 | 20.5 | -25.6 | NP_116364 | 5' arm 3' arm | ||
| 10721 | + | 33616 | 86 | 20.5 | -28.8 | NP_116360 | 5' arm 3' arm | ||
| 10720 | + | 32336 | 86 | 20.5 | -22.1 | NP_116359 | 5' arm 3' arm | ||
| 10719 | + | 28626 | 90 | 21 | -24.7 | NP_116355 | 5' arm 3' arm | ||
| 10718 | + | 18895 | 79 | 19 | -26.6 | NP_116346 | 5' arm 3' arm | ||
| 10717 | + | 18613 | 90 | 21 | -21.8 | NP_116346 | 5' arm 3' arm | ||
| 10714 | + | 14470 | 89 | 19 | -28.8 | NP_116340 | 5' arm 3' arm | ||
| 10713 | + | 14368 | 88 | 21.5 | -25.8 | NP_116339 | 5' arm 3' arm | ||
| 10712 | + | 14270 | 89 | 24 | -24.9 | NP_116340 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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