miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
20411	+	4616	90	19.5	-20.8	NP_818312		5' arm      3' arm
20408	+	2088	88	20	-23.7	NP_818304		5' arm      3' arm
20410	+	4507	89	20.5	-20.1	NP_818312		5' arm      3' arm
20409	+	3782	86	21	-24.8	NP_818309		5' arm      3' arm
20405	+	1066	89	21	-22.3	NP_818303		5' arm      3' arm
20422	+	13697	90	22	-24.4	NP_818319		5' arm      3' arm
20420	+	10907	90	21.5	-21.7	NP_818316		5' arm      3' arm
20437	+	22837	89	22.5	-21.7	NP_818335		5' arm      3' arm
20431	+	18140	90	19.5	-25.8	NP_818326		5' arm      3' arm
20432	+	18383	85	20	-28.3	NP_818327		5' arm      3' arm
20423	+	14051	88	20.5	-24.3	NP_818320		5' arm      3' arm
20430	+	18051	89	21	-25.4	NP_818326		5' arm      3' arm
20425	+	14643	88	22	-25.7			5' arm      3' arm
20427	+	15559	90	22.5	-20			5' arm      3' arm
20424	+	14552	89	22.5	-19.6	NP_818321		5' arm      3' arm
20426	+	15410	90	23	-21.3	NP_818322		5' arm      3' arm
20429	+	16375	90	23.5	-30.1			5' arm      3' arm
20428	+	15674	89	23.5	-22.9			5' arm      3' arm
20421	+	11102	80	19	-24.2	NP_818316		5' arm      3' arm
20419	+	9682	90	19	-32.9			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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