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| GenBank Identifier | RefSeq Acc. | Name |
| 21716071 | NC_004065.1 | Murid herpesvirus 1 |
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| ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF |
Known viral miRNA
|
Match to own genomic region# | Target prediction with RNAhybrid |
| 15714 | + | 53852 | 90 | 21 | -24.6 | YP_214053 | 5' arm 3' arm | ||
| 15712 | + | 53087 | 90 | 20.5 | -26.2 | YP_214051 | 5' arm 3' arm | ||
| 15713 | + | 53490 | 90 | 19.5 | -22.8 | YP_214052 | 5' arm 3' arm | ||
| 15715 | + | 54064 | 88 | 19 | -21.4 | YP_214053 | 5' arm 3' arm | ||
| 15716 | + | 54580 | 88 | 25 | -27.7 | YP_214054 | 5' arm 3' arm | ||
| 15707 | + | 48200 | 90 | 24 | -20.9 | 5' arm 3' arm | |||
| 15699 | + | 41873 | 90 | 19.5 | -24.6 | 5' arm 3' arm | |||
| 15689 | + | 31255 | 88 | 19 | -29.9 | YP_214037 | 5' arm 3' arm | ||
| 15691 | + | 33703 | 90 | 27 | -36.6 | YP_214040 | 5' arm 3' arm | ||
| 15690 | + | 32636 | 88 | 23 | -22 | YP_214040 | 5' arm 3' arm | ||
| 15692 | + | 35643 | 90 | 23 | -28.6 | YP_214041 | 5' arm 3' arm | ||
| 15697 | + | 40796 | 88 | 24.5 | -21.3 | YP_214046 | 5' arm 3' arm | ||
| 15695 | + | 39571 | 89 | 21.5 | -20.8 | YP_214046 | 5' arm 3' arm | ||
| 15693 | + | 37903 | 89 | 20.5 | -24.2 | YP_214045 | 5' arm 3' arm | ||
| 15694 | + | 38502 | 82 | 20.5 | -21.73 | YP_214045 | 5' arm 3' arm | ||
| 15696 | + | 40640 | 90 | 20.5 | -21.8 | YP_214046 | 5' arm 3' arm | ||
| 15701 | + | 44054 | 88 | 20.5 | -25.9 | YP_214047 | 5' arm 3' arm | ||
| 15702 | + | 45119 | 87 | 20.5 | -24.8 | YP_214047 | 5' arm 3' arm | ||
| 15700 | + | 42101 | 90 | 20 | -23.6 | 5' arm 3' arm | |||
| 15698 | + | 41658 | 90 | 19.5 | -23.7 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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