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| GenBank Identifier | RefSeq Acc. | Name |
| 51518014 | NC_006146.1 | Cercopithecine herpesvirus 15 |
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| ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF |
Known viral miRNA
|
Match to own genomic region# | Target prediction with RNAhybrid |
| 28791 | + | 53716 | 89 | 20 | -26.2 | YP_067951 | 5' arm 3' arm | ||
| 28792 | + | 53958 | 89 | 19 | -27.3 | YP_067951 | 5' arm 3' arm | ||
| 28779 | + | 47717 | 90 | 22 | -23 | YP_067950 | 5' arm 3' arm | ||
| 28784 | + | 49821 | 89 | 22.5 | -31.5 | YP_067950 | 5' arm 3' arm | ||
| 28776 | + | 46715 | 90 | 22.5 | -20.9 | YP_067950 | 5' arm 3' arm | ||
| 28933 | - | 2068 | 88 | 21 | -21.7 | YP_067940 | 5' arm 3' arm | ||
| 28760 | + | 34442 | 88 | 26 | -22.3 | 5' arm 3' arm | |||
| 28872 | + | 134579 | 81 | 21.5 | -21.2 | 5' arm 3' arm | |||
| 28763 | + | 36989 | 85 | 24 | -25.4 | 5' arm 3' arm | |||
| 28765 | + | 38540 | 88 | 23.5 | -22.3 | YP_067946 | 5' arm 3' arm | ||
| 28767 | + | 40720 | 90 | 20 | -27.9 | YP_067947 | 5' arm 3' arm | ||
| 28764 | + | 38289 | 89 | 19.5 | -22 | YP_067945 | 5' arm 3' arm | ||
| 28766 | + | 40029 | 90 | 19.5 | -21.5 | YP_067946 | 5' arm 3' arm | ||
| 28772 | + | 44451 | 90 | 23.5 | -27.3 | YP_067950 | 5' arm 3' arm | ||
| 28768 | + | 41433 | 90 | 22 | -27.5 | YP_067948 | 5' arm 3' arm | ||
| 28769 | + | 41576 | 88 | 21.5 | -34.7 | YP_067948 | 5' arm 3' arm | ||
| 28771 | + | 42827 | 89 | 20 | -21.5 | YP_067948 | 5' arm 3' arm | ||
| 28770 | + | 41892 | 88 | 19 | -23.1 | YP_067948 | 5' arm 3' arm | ||
| 28773 | + | 44836 | 87 | 19 | -20.8 | YP_067950 | 5' arm 3' arm | ||
| 28781 | + | 48600 | 89 | 23 | -27.2 | YP_067950 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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