miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8842	+	31426	89	19	-21.4	NP_061538		5' arm      3' arm
8850	+	34898	86	24	-20.2	NP_061546		5' arm      3' arm
8847	+	33367	89	23	-29.9	NP_061540		5' arm      3' arm
8849	+	34792	89	22.5	-22.6	NP_061546		5' arm      3' arm
8845	+	32555	87	22	-26	NP_061540		5' arm      3' arm
8836	+	28452	89	27.5	-35.9			5' arm      3' arm
8832	+	26651	90	19	-24.6	NP_061530		5' arm      3' arm
8815	+	15539	90	20.5	-27.6	NP_061521		5' arm      3' arm
8816	+	15727	89	20.5	-19.7	NP_061521		5' arm      3' arm
8822	+	17266	90	20	-21.7	NP_061522		5' arm      3' arm
8820	+	16801	87	19.5	-22.2	NP_061522		5' arm      3' arm
8821	+	16910	82	19.5	-22.2	NP_061522		5' arm      3' arm
8823	+	17499	88	19	-26.8	NP_061522		5' arm      3' arm
8828	+	20690	89	22	-19.6	NP_061523		5' arm      3' arm
8826	+	19351	89	20.5	-20.4	NP_061523		5' arm      3' arm
8825	+	18924	89	19.5	-26.4			5' arm      3' arm
8827	+	19517	85	19	-22.8	NP_061523		5' arm      3' arm
8831	+	26306	87	25	-19.9			5' arm      3' arm
8829	+	24931	90	23	-22.8	NP_061526		5' arm      3' arm
8830	+	25803	88	19.5	-23.2	NP_061527		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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