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| GenBank Identifier | RefSeq Acc. | Name |
| 38638196 | NC_005264.1 | Psittacid herpesvirus 1 |
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| ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF |
Known viral miRNA
|
Match to own genomic region# | Target prediction with RNAhybrid |
| 24396 | + | 47000 | 90 | 19.5 | -19.7 | NP_944402 | 5' arm 3' arm | ||
| 24400 | + | 49845 | 90 | 19.5 | -23.2 | NP_944403 | 5' arm 3' arm | ||
| 24386 | + | 42521 | 86 | 25 | -21.6 | NP_944401 | 5' arm 3' arm | ||
| 24392 | + | 44582 | 90 | 26.5 | -26.4 | NP_944402 | 5' arm 3' arm | ||
| 24379 | + | 37373 | 86 | 19 | -26.2 | NP_944399 | 5' arm 3' arm | ||
| 24365 | + | 28241 | 90 | 19.5 | -19.5 | NP_944393 | 5' arm 3' arm | ||
| 24370 | + | 33356 | 90 | 24.5 | -26.9 | NP_944396 | 5' arm 3' arm | ||
| 24369 | + | 32915 | 87 | 23 | -22.2 | NP_944396 | 5' arm 3' arm | ||
| 24371 | + | 33657 | 89 | 22 | -24.3 | NP_944397 | 5' arm 3' arm | ||
| 24372 | + | 34120 | 90 | 22 | -23.1 | NP_944397 | 5' arm 3' arm | ||
| 24377 | + | 36193 | 87 | 22 | -27.1 | NP_944398 | 5' arm 3' arm | ||
| 24373 | + | 34239 | 89 | 21.5 | -23.7 | NP_944397 | 5' arm 3' arm | ||
| 24375 | + | 35931 | 89 | 21.5 | -21.4 | NP_944398 | 5' arm 3' arm | ||
| 24368 | + | 32713 | 85 | 21 | -22.1 | NP_944396 | 5' arm 3' arm | ||
| 24376 | + | 36041 | 88 | 20.5 | -23.3 | NP_944398 | 5' arm 3' arm | ||
| 24374 | + | 34482 | 85 | 19.5 | -23.7 | NP_944397 | 5' arm 3' arm | ||
| 24380 | + | 37942 | 90 | 24.5 | -24.2 | 5' arm 3' arm | |||
| 24381 | + | 38507 | 88 | 22 | -22.5 | NP_944400 | 5' arm 3' arm | ||
| 24382 | + | 40271 | 89 | 22 | -19.8 | NP_944400 | 5' arm 3' arm | ||
| 24378 | + | 36468 | 85 | 19 | -24 | NP_944398 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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