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| GenBank Identifier | RefSeq Acc. | Name |
| 21716071 | NC_004065.1 | Murid herpesvirus 1 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 15866 | + | 163317 | 90 | 19 | -26.1 | 5' arm 3' arm | |||
| 15814 | + | 121695 | 89 | 19 | -25.6 | YP_214086 | 5' arm 3' arm | ||
| 15775 | + | 91105 | 80 | 19 | -22.8 | 5' arm 3' arm | |||
| 15878 | + | 174042 | 82 | 19 | -24.7 | YP_214119 | 5' arm 3' arm | ||
| 15746 | + | 73138 | 85 | 19 | -26.3 | 5' arm 3' arm | |||
| 15777 | + | 91690 | 90 | 19 | -22.7 | 5' arm 3' arm | |||
| 15791 | + | 102346 | 87 | 19 | -26.8 | YP_214074 | 5' arm 3' arm | ||
| 16077 | - | 98036 | 89 | 19 | -23.6 | YP_214071 | 5' arm 3' arm | ||
| 16098 | - | 113325 | 87 | 19 | -22.5 | YP_214082 | 5' arm 3' arm | ||
| 16112 | - | 124039 | 85 | 19 | -22.2 | 5' arm 3' arm | |||
| 15864 | + | 160840 | 85 | 19 | -23 | 5' arm 3' arm | |||
| 15857 | + | 149566 | 85 | 19 | -25 | YP_214104 | 5' arm 3' arm | ||
| 15850 | + | 145269 | 90 | 19 | -24.9 | YP_214101 | 5' arm 3' arm | ||
| 16164 | - | 162871 | 81 | 19 | -26.8 | 5' arm 3' arm | |||
| 16215 | - | 203425 | 89 | 19 | -22.6 | YP_214144 | 5' arm 3' arm | ||
| 16152 | - | 149095 | 87 | 19 | -21.2 | YP_214103 | 5' arm 3' arm | ||
| 15768 | + | 88977 | 89 | 19 | -22.8 | 5' arm 3' arm | |||
| 16148 | - | 146951 | 90 | 19 | -32.1 | YP_214102 | 5' arm 3' arm | ||
| 15828 | + | 130439 | 87 | 19 | -21.11 | YP_214089 | 5' arm 3' arm | ||
| 15741 | + | 68800 | 89 | 19 | -25.3 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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