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| GenBank Identifier | RefSeq Acc. | Name |
| 14250967 | NC_002794.1 | Tupaia herpesvirus |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 11127 | - | 174619 | 89 | 19 | -26.1 | 5' arm 3' arm | |||
| 10909 | + | 189104 | 90 | 19 | -22.5 | NP_116479 | 5' arm 3' arm | ||
| 10962 | - | 51415 | 90 | 19 | -21.4 | NP_116379 | 5' arm 3' arm | ||
| 10868 | + | 162686 | 90 | 19 | -31 | NP_116453 | 5' arm 3' arm | ||
| 11086 | - | 123487 | 87 | 19 | -22.4 | NP_116426 | 5' arm 3' arm | ||
| 10718 | + | 18895 | 79 | 19 | -26.6 | NP_116346 | 5' arm 3' arm | ||
| 11069 | - | 104480 | 85 | 19 | -23.4 | NP_116411 | 5' arm 3' arm | ||
| 10714 | + | 14470 | 89 | 19 | -28.8 | NP_116340 | 5' arm 3' arm | ||
| 11129 | - | 176818 | 87 | 19 | -26.7 | NP_116467 | 5' arm 3' arm | ||
| 10954 | - | 46732 | 88 | 19 | -20.7 | NP_116374 | 5' arm 3' arm | ||
| 10725 | + | 39738 | 90 | 19.5 | -19.73 | NP_116368 | 5' arm 3' arm | ||
| 10756 | + | 84431 | 88 | 19.5 | -26.1 | NP_116401 | 5' arm 3' arm | ||
| 10811 | + | 127411 | 90 | 19.5 | -30.4 | NP_116430 | 5' arm 3' arm | ||
| 10752 | + | 75488 | 88 | 19.5 | -24.7 | NP_116399 | 5' arm 3' arm | ||
| 10750 | + | 72805 | 88 | 19.5 | -21.9 | NP_116398 | 5' arm 3' arm | ||
| 11144 | - | 193012 | 90 | 19.5 | -24 | 5' arm 3' arm | |||
| 10818 | + | 131193 | 87 | 19.5 | -25.7 | NP_116432 | 5' arm 3' arm | ||
| 11135 | - | 182274 | 89 | 19.5 | -22.3 | NP_116473 | 5' arm 3' arm | ||
| 11140 | - | 187607 | 86 | 19.5 | -30.4 | NP_116478 | 5' arm 3' arm | ||
| 10758 | + | 86006 | 88 | 19.5 | -28.9 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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