miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
29801	+	90068	90	19	-20.3	YP_081516		5' arm      3' arm
1939	-	122794	87	19	-29	NP_040019		5' arm      3' arm
1578	+	42587	89	19	-23.5	NP_039966		5' arm      3' arm
1636	+	97410	90	19	-23			5' arm      3' arm
29928	+	169287	80	19	-19.9			5' arm      3' arm
1875	-	62718	89	19	-22.8	NP_783786		5' arm      3' arm
30204	-	195553	90	19	-22.8			5' arm      3' arm
1888	-	67892	88	19	-26.5	NP_039982		5' arm      3' arm
1897	-	72757	88	19	-26.1	NP_039983		5' arm      3' arm
1842	-	39580	87	19	-21.2	NP_783780		5' arm      3' arm
1704	+	136334	87	19	-21.4	NP_040028		5' arm      3' arm
29753	+	42478	90	19	-24.4	YP_081491		5' arm      3' arm
29930	+	171097	84	19	-22.52	YP_081561		5' arm      3' arm
29799	+	89161	88	19	-22.7	YP_081516		5' arm      3' arm
1751	+	168475	87	19	-23.8	NP_783795		5' arm      3' arm
2000	-	183171	89	19	-21.9			5' arm      3' arm
2055	-	229380	89	19	-19.5	NP_040085		5' arm      3' arm
2043	-	221653	89	19	-26.8	NP_040114		5' arm      3' arm
29951	+	199799	83	19	-21.8	YP_081589		5' arm      3' arm
1789	+	212452	87	19	-25.6	NP_783806		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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