miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
24905	-	4859	90	21.5	-23.6	NP_945035		5' arm      3' arm
24914	-	10376	87	21.5	-22.6	NP_945044		5' arm      3' arm
24871	+	34552	90	21.5	-21.4	NP_945075		5' arm      3' arm
24881	+	40897	88	21.5	-24.8	NP_945089		5' arm      3' arm
24842	+	16820	90	21.5	-21.7	NP_945050		5' arm      3' arm
24838	+	15294	89	21.5	-20.3	NP_945048		5' arm      3' arm
24885	+	44161	88	21.5	-25.3	NP_945094		5' arm      3' arm
24836	+	14531	89	21.5	-20.3	NP_945047		5' arm      3' arm
24928	-	18753	89	21.5	-25	NP_945050		5' arm      3' arm
24886	+	45122	89	21.5	-20.9	NP_945096		5' arm      3' arm
24908	-	7096	89	21.5	-20.2	NP_945040		5' arm      3' arm
24907	-	5967	89	21.5	-20.2	NP_945037		5' arm      3' arm
24887	+	45433	89	21.5	-25.5	NP_945097		5' arm      3' arm
24895	+	48827	90	21.5	-24.9	NP_945102		5' arm      3' arm
24900	+	53734	90	21.5	-26.1	NP_945111		5' arm      3' arm
24970	-	54079	89	21.5	-31.5	NP_945111		5' arm      3' arm
24851	+	23607	87	22	-26.3	NP_945058		5' arm      3' arm
24925	-	17070	88	22	-30.1	NP_945050		5' arm      3' arm
24953	-	39698	80	22	-22.8			5' arm      3' arm
24839	+	15421	87	22	-23.3	NP_945048		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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