miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
9702	-	8355	87	21.5	-25.3			5' arm      3' arm
9760	-	134721	88	21.5	-30	NP_066902		5' arm      3' arm
9741	-	112050	82	21.5	-20.8	NP_066885		5' arm      3' arm
9734	-	78098	90	21.5	-22.24	NP_066868		5' arm      3' arm
9640	+	125228	87	21.5	-25.3			5' arm      3' arm
9681	+	162740	88	21.5	-30	NP_066902		5' arm      3' arm
9726	-	61370	89	21.5	-20.2	NP_066860		5' arm      3' arm
9771	-	156118	82	22	-25	NP_066903		5' arm      3' arm
9633	+	120127	89	22	-21.8	NP_066890		5' arm      3' arm
9669	+	141353	82	22	-25	NP_066903		5' arm      3' arm
9740	-	103662	87	22	-21	NP_066879		5' arm      3' arm
9617	+	66914	81	22	-26.2	NP_066861		5' arm      3' arm
9730	-	73306	90	22	-28.2	NP_066864		5' arm      3' arm
9719	-	45353	89	22	-29.6	NP_066849		5' arm      3' arm
9609	+	40833	81	22	-20.5	NP_066845		5' arm      3' arm
9611	+	44356	90	22	-21.3	NP_066849		5' arm      3' arm
9605	+	24740	89	22.5	-20.2	NP_066836		5' arm      3' arm
9652	+	130152	89	22.5	-29.9			5' arm      3' arm
9650	+	129415	90	22.5	-28.3	NP_066899		5' arm      3' arm
9715	-	27874	90	22.5	-27.1	NP_066838		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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