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| GenBank Identifier | RefSeq Acc. | Name |
| 14250967 | NC_002794.1 | Tupaia herpesvirus |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 10797 | + | 119336 | 90 | 20 | -22.2 | NP_116424 | 5' arm 3' arm | ||
| 10709 | + | 9167 | 88 | 20 | -26.6 | NP_116334 | 5' arm 3' arm | ||
| 10904 | + | 187180 | 85 | 20 | -23.6 | NP_116478 | 5' arm 3' arm | ||
| 11131 | - | 177786 | 89 | 20 | -21.1 | NP_116468 | 5' arm 3' arm | ||
| 11114 | - | 155443 | 89 | 20 | -32.3 | NP_116447 | 5' arm 3' arm | ||
| 10754 | + | 76876 | 88 | 20 | -26.5 | NP_116400 | 5' arm 3' arm | ||
| 11122 | - | 164055 | 90 | 20 | -24.6 | NP_116454 | 5' arm 3' arm | ||
| 11020 | - | 83729 | 88 | 20 | -27.1 | NP_116401 | 5' arm 3' arm | ||
| 11049 | - | 96138 | 90 | 20 | -20.2 | NP_116408 | 5' arm 3' arm | ||
| 10845 | + | 145365 | 87 | 20 | -24.8 | NP_116441 | 5' arm 3' arm | ||
| 10854 | + | 152650 | 87 | 20 | -25 | NP_116445 | 5' arm 3' arm | ||
| 10813 | + | 129769 | 90 | 20 | -22.4 | NP_116431 | 5' arm 3' arm | ||
| 10816 | + | 130660 | 85 | 20 | -24.5 | NP_116432 | 5' arm 3' arm | ||
| 11097 | - | 140021 | 87 | 20 | -27.5 | NP_116436 | 5' arm 3' arm | ||
| 11102 | - | 143155 | 89 | 20 | -21.6 | NP_116437 | 5' arm 3' arm | ||
| 11143 | - | 192220 | 88 | 20 | -20 | NP_116481 | 5' arm 3' arm | ||
| 10753 | + | 76087 | 84 | 20 | -27.7 | NP_116400 | 5' arm 3' arm | ||
| 11024 | - | 85113 | 85 | 20 | -28.8 | NP_116401 | 5' arm 3' arm | ||
| 11029 | - | 86647 | 87 | 20 | -26.4 | NP_116403 | 5' arm 3' arm | ||
| 11033 | - | 90534 | 89 | 20 | -28.9 | NP_116406 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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