miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
26329	+	48796	89	21.5	-31.5	NP_958302		5' arm      3' arm
26356	-	15839	90	21.5	-30	NP_958264		5' arm      3' arm
26319	+	42682	89	21.5	-20.9			5' arm      3' arm
26307	+	38257	86	21.5	-26.2	NP_958290		5' arm      3' arm
26353	-	12824	90	21.5	-26.6			5' arm      3' arm
26403	-	34824	90	21.5	-27.9	NP_958289		5' arm      3' arm
26354	-	13033	88	21.5	-23.8			5' arm      3' arm
26297	+	32084	88	21.5	-19.4	NP_958286		5' arm      3' arm
26295	+	29565	89	21.5	-25.4	NP_958280		5' arm      3' arm
26290	+	26159	88	21.5	-23	NP_958276		5' arm      3' arm
26408	-	37134	87	22	-20.8	NP_958289		5' arm      3' arm
26257	+	2056	89	22	-23.8	NP_958243		5' arm      3' arm
26406	-	36585	89	22	-24.6	NP_958289		5' arm      3' arm
26343	-	6177	84	22	-27.1	NP_958250		5' arm      3' arm
26265	+	6756	89	22	-22.7	NP_958251		5' arm      3' arm
26268	+	8617	88	22	-23.9			5' arm      3' arm
26432	-	49011	88	22	-35.9	NP_958302		5' arm      3' arm
26388	-	28329	90	22	-24.3	NP_958278		5' arm      3' arm
26305	+	37992	89	22	-22.5	NP_958290		5' arm      3' arm
26351	-	10657	89	22	-24	NP_958256		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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