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| GenBank Identifier | RefSeq Acc. | Name |
| 51518014 | NC_006146.1 | Cercopithecine herpesvirus 15 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 28842 | + | 110186 | 87 | 20 | -26.4 | YP_067990 | 5' arm 3' arm | ||
| 29027 | - | 62035 | 83 | 20 | -22.1 | YP_067955 | 5' arm 3' arm | ||
| 28815 | + | 74226 | 89 | 20 | -20 | YP_067965 | 5' arm 3' arm | ||
| 28817 | + | 83747 | 89 | 20 | -28.5 | YP_067968 | 5' arm 3' arm | ||
| 28830 | + | 95337 | 90 | 20 | -21.21 | YP_067977 | 5' arm 3' arm | ||
| 28774 | + | 46171 | 88 | 20 | -29.8 | YP_067950 | 5' arm 3' arm | ||
| 28824 | + | 91164 | 89 | 20 | -22.5 | YP_067973 | 5' arm 3' arm | ||
| 29075 | - | 106042 | 89 | 20 | -26.7 | YP_067986 | 5' arm 3' arm | ||
| 29019 | - | 56080 | 87 | 20 | -23.9 | YP_067951 | 5' arm 3' arm | ||
| 28771 | + | 42827 | 89 | 20 | -21.5 | YP_067948 | 5' arm 3' arm | ||
| 28775 | + | 46606 | 87 | 20 | -26.5 | YP_067950 | 5' arm 3' arm | ||
| 28782 | + | 48832 | 90 | 20 | -20.6 | YP_067950 | 5' arm 3' arm | ||
| 28880 | + | 140881 | 89 | 20 | -21.3 | 5' arm 3' arm | |||
| 28767 | + | 40720 | 90 | 20 | -27.9 | YP_067947 | 5' arm 3' arm | ||
| 28838 | + | 105080 | 88 | 20 | -28.1 | YP_067985 | 5' arm 3' arm | ||
| 28917 | + | 158318 | 88 | 20 | -20.2 | YP_068012 | 5' arm 3' arm | ||
| 28836 | + | 102536 | 90 | 20 | -29 | YP_067984 | 5' arm 3' arm | ||
| 28835 | + | 101668 | 85 | 20 | -21.2 | YP_067982 | 5' arm 3' arm | ||
| 29108 | - | 133188 | 81 | 20 | -30 | 5' arm 3' arm | |||
| 28913 | + | 155058 | 88 | 20 | -21.3 | YP_068010 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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