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| GenBank Identifier | RefSeq Acc. | Name |
| 38638196 | NC_005264.1 | Psittacid herpesvirus 1 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 24736 | - | 143780 | 87 | 20 | -23.5 | NP_944448 | 5' arm 3' arm | ||
| 24546 | - | 2670 | 90 | 20 | -23.7 | NP_944380 | 5' arm 3' arm | ||
| 24505 | + | 131666 | 89 | 20 | -20.4 | 5' arm 3' arm | |||
| 24622 | - | 74817 | 90 | 20 | -24.5 | NP_944413 | 5' arm 3' arm | ||
| 24677 | - | 109759 | 88 | 20 | -22.1 | NP_944434 | 5' arm 3' arm | ||
| 24432 | + | 68939 | 88 | 20 | -19.7 | NP_944410 | 5' arm 3' arm | ||
| 24717 | - | 133421 | 90 | 20 | -22.3 | NP_944442 | 5' arm 3' arm | ||
| 24643 | - | 88330 | 87 | 20 | -22.2 | NP_944420 | 5' arm 3' arm | ||
| 24437 | + | 73548 | 87 | 20 | -21.6 | NP_944412 | 5' arm 3' arm | ||
| 24438 | + | 76564 | 85 | 20 | -27.1 | 5' arm 3' arm | |||
| 24343 | + | 7921 | 88 | 20 | -23.5 | NP_944382 | 5' arm 3' arm | ||
| 24653 | - | 93457 | 89 | 20 | -25.5 | NP_944423 | 5' arm 3' arm | ||
| 24440 | + | 77544 | 89 | 20 | -28.1 | NP_944415 | 5' arm 3' arm | ||
| 24540 | + | 159395 | 90 | 20 | -21.4 | NP_944441 | 5' arm 3' arm | ||
| 24742 | - | 146682 | 87 | 20 | -26.3 | NP_944450 | 5' arm 3' arm | ||
| 24511 | + | 138690 | 90 | 20 | -27 | NP_944446 | 5' arm 3' arm | ||
| 24444 | + | 82747 | 90 | 20 | -20.9 | NP_944418 | 5' arm 3' arm | ||
| 24445 | + | 82895 | 89 | 20 | -26.5 | NP_944418 | 5' arm 3' arm | ||
| 24393 | + | 44843 | 88 | 20 | -19.4 | NP_944402 | 5' arm 3' arm | ||
| 24390 | + | 44035 | 89 | 20 | -29.9 | NP_944402 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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