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| GenBank Identifier | RefSeq Acc. | Name |
| 38638196 | NC_005264.1 | Psittacid herpesvirus 1 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 24440 | + | 77544 | 89 | 20 | -28.1 | NP_944415 | 5' arm 3' arm | ||
| 24606 | - | 57071 | 89 | 20 | -24.4 | NP_944409 | 5' arm 3' arm | ||
| 24653 | - | 93457 | 89 | 20 | -25.5 | NP_944423 | 5' arm 3' arm | ||
| 24622 | - | 74817 | 90 | 20 | -24.5 | NP_944413 | 5' arm 3' arm | ||
| 24417 | + | 60217 | 90 | 20 | -21.02 | NP_944409 | 5' arm 3' arm | ||
| 24736 | - | 143780 | 87 | 20 | -23.5 | NP_944448 | 5' arm 3' arm | ||
| 24732 | - | 141699 | 90 | 20 | -26 | NP_944447 | 5' arm 3' arm | ||
| 24607 | - | 59322 | 90 | 20 | -22.41 | NP_944409 | 5' arm 3' arm | ||
| 24406 | + | 53918 | 90 | 20 | -23.84 | NP_944405 | 5' arm 3' arm | ||
| 24666 | - | 103010 | 89 | 20 | -22.2 | NP_944431 | 5' arm 3' arm | ||
| 24605 | - | 55904 | 89 | 20 | -22 | NP_944408 | 5' arm 3' arm | ||
| 24562 | - | 20445 | 90 | 20 | -28.07 | 5' arm 3' arm | |||
| 24747 | - | 150506 | 89 | 20 | -20.4 | 5' arm 3' arm | |||
| 24444 | + | 82747 | 90 | 20 | -20.9 | NP_944418 | 5' arm 3' arm | ||
| 24344 | + | 10106 | 90 | 20.5 | -24.4 | NP_944382 | 5' arm 3' arm | ||
| 24448 | + | 85394 | 88 | 20.5 | -21.3 | NP_944420 | 5' arm 3' arm | ||
| 24638 | - | 86699 | 88 | 20.5 | -21.8 | NP_944420 | 5' arm 3' arm | ||
| 24655 | - | 93829 | 89 | 20.5 | -20.5 | NP_944423 | 5' arm 3' arm | ||
| 24697 | - | 123322 | 85 | 20.5 | -28.3 | NP_944441 | 5' arm 3' arm | ||
| 24648 | - | 90502 | 90 | 20.5 | -27 | NP_944421 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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