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GenBank Identifier | RefSeq Acc. | Name |
48697190 | NC_005887.1 | Burkholderia cepacia complex phage BcepC6B |
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ID | strand | start position | length |
sRNA loop score![]() |
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
28064 | + | 30065 | 81 | 19 | -24.4 | YP_024952 | 5' arm 3' arm | ||
28174 | - | 34690 | 89 | 19 | -19.9 | YP_024958 | 5' arm 3' arm | ||
28164 | - | 29010 | 85 | 19 | -21.1 | YP_024951 | 5' arm 3' arm | ||
28052 | + | 26993 | 86 | 19 | -24.8 | YP_024948 | 5' arm 3' arm | ||
28047 | + | 24853 | 89 | 19 | -26.9 | YP_024945 | 5' arm 3' arm | ||
28157 | - | 25002 | 86 | 19 | -20.6 | YP_024945 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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