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| GenBank Identifier | RefSeq Acc. | Name |
| 14250967 | NC_002794.1 | Tupaia herpesvirus |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 10848 | + | 147870 | 86 | 23 | -24.2 | NP_116443 | 5' arm 3' arm | ||
| 10952 | - | 46207 | 90 | 23 | -27.8 | NP_116373 | 5' arm 3' arm | ||
| 10748 | + | 71153 | 90 | 23 | -27.6 | NP_116397 | 5' arm 3' arm | ||
| 10741 | + | 62494 | 90 | 23 | -25.1 | NP_116386 | 5' arm 3' arm | ||
| 11068 | - | 103763 | 90 | 23 | -22.4 | NP_116411 | 5' arm 3' arm | ||
| 11025 | - | 85584 | 88 | 23 | -19.8 | NP_116401 | 5' arm 3' arm | ||
| 10894 | + | 180118 | 82 | 23 | -23.3 | NP_116470 | 5' arm 3' arm | ||
| 10992 | - | 66196 | 90 | 23 | -21.84 | NP_116390 | 5' arm 3' arm | ||
| 10789 | + | 114122 | 90 | 23 | -22.2 | NP_116420 | 5' arm 3' arm | ||
| 10935 | - | 20536 | 90 | 23 | -26.8 | NP_116348 | 5' arm 3' arm | ||
| 10885 | + | 173449 | 90 | 23 | -22.5 | 5' arm 3' arm | |||
| 10874 | + | 165285 | 90 | 22.5 | -25.8 | NP_116454 | 5' arm 3' arm | ||
| 10707 | + | 7592 | 89 | 22.5 | -26.9 | NP_116333 | 5' arm 3' arm | ||
| 10835 | + | 138581 | 86 | 22.5 | -32.1 | NP_116435 | 5' arm 3' arm | ||
| 10840 | + | 142298 | 90 | 22.5 | -24.5 | NP_116437 | 5' arm 3' arm | ||
| 11050 | - | 97306 | 90 | 22.5 | -29.8 | NP_116409 | 5' arm 3' arm | ||
| 10839 | + | 141471 | 89 | 22.5 | -22.8 | NP_116436 | 5' arm 3' arm | ||
| 10795 | + | 118819 | 85 | 22.5 | -26.8 | NP_116423 | 5' arm 3' arm | ||
| 10745 | + | 66107 | 90 | 22.5 | -28.94 | NP_116390 | 5' arm 3' arm | ||
| 10702 | + | 3818 | 87 | 22.5 | -30.5 | NP_116331 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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