miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
362	+	12967	90	19.5	-27.8	AP_000307		5' arm      3' arm
361	+	12205	87	19.5	-20.4	AP_000307		5' arm      3' arm
366	+	21117	81	19.5	-26.2	AP_000314		5' arm      3' arm
422	-	27190	80	19.5	-20.4	AP_000320		5' arm      3' arm
356	+	9705	90	19.5	-25.6	AP_000305		5' arm      3' arm
421	-	26742	86	19.5	-19.9	AP_000319		5' arm      3' arm
413	-	22953	82	19.5	-22.2	AP_000315		5' arm      3' arm
352	+	6681	90	19.5	-22.6	AP_000304		5' arm      3' arm
343	+	2120	89	19.5	-21.2	AP_000301		5' arm      3' arm
376	+	32326	83	19.5	-23	AP_000330		5' arm      3' arm
371	+	23310	81	19	-25.2	AP_000315		5' arm      3' arm
364	+	15017	88	19	-19.6	AP_000308		5' arm      3' arm
387	-	12286	86	19	-20.2	AP_000307		5' arm      3' arm
382	-	8849	90	19	-25.6	AP_000305		5' arm      3' arm
365	+	18461	85	19	-21	AP_000313		5' arm      3' arm
394	-	14880	90	19	-19.7	AP_000308		5' arm      3' arm
395	-	15236	90	19	-23.3	AP_000308		5' arm      3' arm
399	-	16943	88	19	-20.2	AP_000310		5' arm      3' arm
410	-	22147	90	19	-21.9	AP_000315		5' arm      3' arm
411	-	22466	90	19	-22.1	AP_000315		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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