miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
24914	-	10376	87	21.5	-22.6	NP_945044		5' arm      3' arm
24959	-	46709	89	21.5	-23.3	NP_945098		5' arm      3' arm
24887	+	45433	89	21.5	-25.5	NP_945097		5' arm      3' arm
24947	-	33941	85	21.5	-20.6	NP_945074		5' arm      3' arm
24948	-	34540	86	21.5	-19.7	NP_945075		5' arm      3' arm
24904	-	4071	88	21.5	-21.9	NP_945034		5' arm      3' arm
24928	-	18753	89	21.5	-25	NP_945050		5' arm      3' arm
24842	+	16820	90	21.5	-21.7	NP_945050		5' arm      3' arm
24907	-	5967	89	21.5	-20.2	NP_945037		5' arm      3' arm
24838	+	15294	89	21.5	-20.3	NP_945048		5' arm      3' arm
24836	+	14531	89	21.5	-20.3	NP_945047		5' arm      3' arm
24900	+	53734	90	21.5	-26.1	NP_945111		5' arm      3' arm
24967	-	50312	90	21.5	-23.9	NP_945105		5' arm      3' arm
24895	+	48827	90	21.5	-24.9	NP_945102		5' arm      3' arm
24811	+	4657	90	21	-21.2	NP_945035		5' arm      3' arm
24962	-	48507	87	21	-22.2	NP_945102		5' arm      3' arm
24858	+	27212	90	21	-21.5	NP_945062		5' arm      3' arm
24901	+	53837	90	21	-21.7	NP_945111		5' arm      3' arm
24860	+	30265	89	21	-27.5	NP_945067		5' arm      3' arm
24918	-	11419	90	21	-22.9	NP_945044		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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