miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
18446	-	35959	88	22	-24.5	NP_817493		5' arm      3' arm
18504	-	57813	80	22	-28.1	NP_817543		5' arm      3' arm
18526	-	68668	90	21.5	-26	NP_817569		5' arm      3' arm
18383	-	12395	89	21.5	-27.2	NP_817468		5' arm      3' arm
18435	-	30782	89	21.5	-26.5	NP_817482		5' arm      3' arm
18251	+	1981	90	21.5	-29	NP_817457		5' arm      3' arm
18525	-	68566	87	21.5	-25.2	NP_817569		5' arm      3' arm
18409	-	21241	87	21.5	-24.1	NP_817474		5' arm      3' arm
18520	-	65812	81	21.5	-20.2	NP_817562		5' arm      3' arm
18398	-	16335	89	21.5	-21.8	NP_817472		5' arm      3' arm
18380	-	11806	74	21.5	-26	NP_817468		5' arm      3' arm
18462	-	42088	88	21.5	-24.4	NP_817508		5' arm      3' arm
18502	-	57188	86	21.5	-32.4	NP_817542		5' arm      3' arm
18495	-	54702	90	21.5	-21.5	NP_817538		5' arm      3' arm
18494	-	54388	89	21.5	-20.8	NP_817538		5' arm      3' arm
18532	-	72284	88	21.5	-22.3	NP_817581		5' arm      3' arm
18258	+	7504	89	21.5	-23.1	NP_817461		5' arm      3' arm
18483	-	50837	90	21.5	-21.7	NP_817529		5' arm      3' arm
18381	-	12094	90	21.5	-22.3	NP_817468		5' arm      3' arm
18454	-	40116	89	21.5	-22.6	NP_817504		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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