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| GenBank Identifier | RefSeq Acc. | Name |
| 14250967 | NC_002794.1 | Tupaia herpesvirus |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 10703 | + | 4545 | 89 | 22 | -19.7 | NP_116332 | 5' arm 3' arm | ||
| 10699 | + | 2329 | 88 | 22 | -29.7 | NP_116331 | 5' arm 3' arm | ||
| 10808 | + | 125778 | 87 | 22 | -27.5 | NP_116428 | 5' arm 3' arm | ||
| 10937 | - | 34777 | 87 | 22 | -21.8 | NP_116361 | 5' arm 3' arm | ||
| 10799 | + | 120212 | 89 | 22 | -20.5 | NP_116424 | 5' arm 3' arm | ||
| 10822 | + | 132079 | 88 | 22 | -22.2 | NP_116432 | 5' arm 3' arm | ||
| 10736 | + | 49657 | 89 | 22 | -29.5 | NP_116378 | 5' arm 3' arm | ||
| 10861 | + | 159126 | 89 | 22 | -26 | NP_116451 | 5' arm 3' arm | ||
| 11018 | - | 82834 | 87 | 22 | -20.3 | NP_116401 | 5' arm 3' arm | ||
| 10974 | - | 57416 | 89 | 22 | -21.4 | NP_116384 | 5' arm 3' arm | ||
| 11136 | - | 182940 | 90 | 22 | -26 | NP_116475 | 5' arm 3' arm | ||
| 10749 | + | 72532 | 90 | 22 | -23.3 | NP_116398 | 5' arm 3' arm | ||
| 11070 | - | 105793 | 89 | 22 | -21.4 | NP_116413 | 5' arm 3' arm | ||
| 11035 | - | 92049 | 88 | 22 | -20.6 | NP_116407 | 5' arm 3' arm | ||
| 10921 | - | 8672 | 88 | 22 | -25 | NP_116334 | 5' arm 3' arm | ||
| 11115 | - | 157060 | 90 | 22 | -31.5 | NP_116448 | 5' arm 3' arm | ||
| 11145 | - | 193881 | 85 | 21.5 | -24.9 | NP_116483 | 5' arm 3' arm | ||
| 11032 | - | 89758 | 90 | 21.5 | -28.1 | NP_116405 | 5' arm 3' arm | ||
| 11047 | - | 95654 | 90 | 21.5 | -28.4 | NP_116408 | 5' arm 3' arm | ||
| 10711 | + | 10567 | 90 | 21.5 | -28.5 | NP_116336 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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