miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
24692	-	120553	88	22	-27.8			5' arm      3' arm
24408	+	55889	89	22	-29.6	NP_944408		5' arm      3' arm
24409	+	56294	88	22	-19.4	NP_944409		5' arm      3' arm
24713	-	131117	89	22	-28.9			5' arm      3' arm
24612	-	64539	86	22	-31.2	NP_944409		5' arm      3' arm
24603	-	55650	84	22	-25.09	NP_944408		5' arm      3' arm
24383	+	41092	79	21.5	-35.2			5' arm      3' arm
24664	-	101502	89	21.5	-20.7	NP_944430		5' arm      3' arm
24385	+	42424	88	21.5	-21.62	NP_944401		5' arm      3' arm
24731	-	140855	89	21.5	-22.5	NP_944447		5' arm      3' arm
24391	+	44291	90	21.5	-23.2	NP_944402		5' arm      3' arm
24451	+	88148	90	21.5	-22.8	NP_944420		5' arm      3' arm
24471	+	103905	90	21.5	-21.8	NP_944431		5' arm      3' arm
24733	-	142064	88	21.5	-20.4	NP_944447		5' arm      3' arm
24527	+	153388	89	21.5	-26.2			5' arm      3' arm
24735	-	143535	90	21.5	-20.8	NP_944448		5' arm      3' arm
24517	+	147630	90	21.5	-24.6			5' arm      3' arm
24488	+	118170	88	21.5	-27.4	NP_944440		5' arm      3' arm
24657	-	95353	88	21.5	-23.7	NP_944424		5' arm      3' arm
24685	-	115699	90	21.5	-23.9			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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