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| GenBank Identifier | RefSeq Acc. | Name |
| 45429963 | NC_005808.1 | Bordetella phage BMP-1 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 26756 | - | 22048 | 88 | 20.5 | -22.4 | NP_996583 | 5' arm 3' arm | ||
| 26801 | - | 38297 | 83 | 20.5 | -26.6 | NP_996604 | 5' arm 3' arm | ||
| 26692 | + | 20013 | 88 | 20.5 | -27.6 | NP_996580 | 5' arm 3' arm | ||
| 26646 | + | 5330 | 89 | 20 | -25.5 | NP_996571 | 5' arm 3' arm | ||
| 26642 | + | 4583 | 89 | 20 | -23.8 | NP_996571 | 5' arm 3' arm | ||
| 26707 | + | 26174 | 83 | 20 | -23.8 | NP_996588 | 5' arm 3' arm | ||
| 26704 | + | 24501 | 89 | 20 | -22.3 | NP_996587 | 5' arm 3' arm | ||
| 26702 | + | 22874 | 89 | 20 | -26.2 | NP_996584 | 5' arm 3' arm | ||
| 26800 | - | 38161 | 90 | 20 | -23.7 | NP_996604 | 5' arm 3' arm | ||
| 26715 | + | 31277 | 84 | 20 | -25.1 | NP_996594 | 5' arm 3' arm | ||
| 26668 | + | 13523 | 83 | 20 | -27 | NP_996573 | 5' arm 3' arm | ||
| 26747 | - | 16221 | 90 | 20 | -22.1 | NP_996575 | 5' arm 3' arm | ||
| 26749 | - | 17321 | 80 | 20 | -25.3 | NP_996576 | 5' arm 3' arm | ||
| 26724 | + | 39512 | 87 | 20 | -26.8 | NP_996607 | 5' arm 3' arm | ||
| 26745 | - | 15516 | 89 | 20 | -26.63 | NP_996575 | 5' arm 3' arm | ||
| 26750 | - | 18015 | 90 | 20 | -25.8 | 5' arm 3' arm | |||
| 26649 | + | 6247 | 85 | 20 | -23.1 | NP_996572 | 5' arm 3' arm | ||
| 26708 | + | 26842 | 90 | 20 | -23.2 | NP_996590 | 5' arm 3' arm | ||
| 26791 | - | 36104 | 90 | 20 | -20.5 | NP_996602 | 5' arm 3' arm | ||
| 26784 | - | 34287 | 87 | 20 | -24.9 | NP_996599 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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