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| GenBank Identifier | RefSeq Acc. | Name |
| 48697190 | NC_005887.1 | Burkholderia cepacia complex phage BcepC6B |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 28086 | + | 36008 | 87 | 20.5 | -23.4 | YP_024959 | 5' arm 3' arm | ||
| 28048 | + | 26056 | 88 | 20.5 | -19.5 | 5' arm 3' arm | |||
| 28072 | + | 31857 | 87 | 20.5 | -20.3 | YP_024953 | 5' arm 3' arm | ||
| 28097 | + | 40288 | 89 | 20.5 | -21.8 | YP_024966 | 5' arm 3' arm | ||
| 28123 | - | 9150 | 88 | 20.5 | -20.5 | YP_024932 | 5' arm 3' arm | ||
| 28053 | + | 27562 | 89 | 20.5 | -29 | YP_024949 | 5' arm 3' arm | ||
| 28033 | + | 18980 | 90 | 20.5 | -28.4 | 5' arm 3' arm | |||
| 28170 | - | 31718 | 88 | 20.5 | -23.3 | YP_024953 | 5' arm 3' arm | ||
| 28039 | + | 22115 | 84 | 20.5 | -31.4 | YP_024940 | 5' arm 3' arm | ||
| 28103 | + | 42298 | 90 | 20.5 | -21.4 | YP_024966 | 5' arm 3' arm | ||
| 28120 | - | 7564 | 86 | 20.5 | -21.9 | YP_024929 | 5' arm 3' arm | ||
| 28075 | + | 32639 | 84 | 20 | -22.8 | YP_024954 | 5' arm 3' arm | ||
| 28003 | + | 2550 | 90 | 20 | -24.6 | YP_024923 | 5' arm 3' arm | ||
| 28172 | - | 33271 | 90 | 20 | -24.1 | 5' arm 3' arm | |||
| 28118 | - | 6946 | 89 | 20 | -26.1 | YP_024928 | 5' arm 3' arm | ||
| 28144 | - | 18485 | 87 | 20 | -21.4 | YP_024937 | 5' arm 3' arm | ||
| 28088 | + | 36570 | 88 | 20 | -23.9 | YP_024960 | 5' arm 3' arm | ||
| 28089 | + | 37614 | 89 | 20 | -20.9 | 5' arm 3' arm | |||
| 28095 | + | 39977 | 89 | 20 | -20.4 | YP_024966 | 5' arm 3' arm | ||
| 28051 | + | 26883 | 90 | 20 | -20.9 | YP_024948 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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