miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8851	+	36505	87	19.5	-24.7	NP_061549		5' arm      3' arm
8846	+	32815	89	19.5	-22.9	NP_061540		5' arm      3' arm
8830	+	25803	88	19.5	-23.2	NP_061527		5' arm      3' arm
8825	+	18924	89	19.5	-26.4			5' arm      3' arm
8821	+	16910	82	19.5	-22.2	NP_061522		5' arm      3' arm
8820	+	16801	87	19.5	-22.2	NP_061522		5' arm      3' arm
8873	+	54177	89	19.5	-22.4			5' arm      3' arm
8833	+	27623	87	19.5	-23.4	NP_061531		5' arm      3' arm
8936	-	55393	90	19.5	-21.9	NP_061587		5' arm      3' arm
8898	-	16888	89	19	-24.7	NP_061522		5' arm
8810	+	11883	90	19	-20	NP_061515		5' arm      3' arm
8912	-	34027	89	19	-23.2	NP_061542		5' arm      3' arm
8915	-	35769	89	19	-20	NP_061547		3' arm
8916	-	37649	89	19	-22.77			5' arm      3' arm
8917	-	38418	90	19	-22.9	NP_061552		5' arm      3' arm
8832	+	26651	90	19	-24.6	NP_061530		5' arm      3' arm
8842	+	31426	89	19	-21.4	NP_061538		5' arm      3' arm
8921	-	43170	90	19	-21.9	NP_061562		5' arm      3' arm
8843	+	32169	90	19	-19.6	NP_061539		5' arm      3' arm
8928	-	48643	90	19	-20.5	NP_061570		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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