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GenBank Identifier | RefSeq Acc. | Name |
57753434 | NC_006633.1 | Cotesia congregata virus segment Circle1 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
31406 | - | 9389 | 90 | 19.5 | -26.6 | 5' arm 3' arm | |||
31492 | - | 8503 | 90 | 19.5 | -30.5 | 5' arm 3' arm | |||
31498 | + | 25183 | 88 | 19.5 | -20.9 | 5' arm 3' arm | |||
31431 | + | 22700 | 90 | 19.5 | -19.8 | 5' arm 3' arm | |||
31485 | - | 753 | 90 | 19.5 | -23.3 | 5' arm 3' arm | |||
31486 | - | 6631 | 87 | 19 | -22.9 | 5' arm 3' arm | |||
31500 | + | 27982 | 90 | 19 | -28.1 | 5' arm 3' arm | |||
31452 | + | 12959 | 90 | 19 | -22.4 | 5' arm 3' arm | |||
31449 | - | 4090 | 90 | 19 | -28.8 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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