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| GenBank Identifier | RefSeq Acc. | Name |
| 38638196 | NC_005264.1 | Psittacid herpesvirus 1 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 24401 | + | 50279 | 89 | 21.5 | -23.5 | NP_944403 | 5' arm 3' arm | ||
| 24403 | + | 51103 | 90 | 21.5 | -20.7 | NP_944404 | 5' arm 3' arm | ||
| 24405 | + | 53596 | 88 | 21.5 | -22.8 | NP_944405 | 5' arm 3' arm | ||
| 24451 | + | 88148 | 90 | 21.5 | -22.8 | NP_944420 | 5' arm 3' arm | ||
| 24719 | - | 133758 | 90 | 21.5 | -21.6 | NP_944442 | 5' arm 3' arm | ||
| 24586 | - | 38982 | 86 | 21.5 | -25.1 | NP_944400 | 5' arm 3' arm | ||
| 24436 | + | 71906 | 89 | 21.5 | -28.1 | NP_944412 | 5' arm 3' arm | ||
| 24548 | - | 4813 | 88 | 21.5 | -19.5 | 5' arm 3' arm | |||
| 24592 | - | 42470 | 90 | 21.5 | -23.1 | NP_944401 | 5' arm 3' arm | ||
| 24427 | + | 65447 | 89 | 21.5 | -24.1 | NP_944409 | 5' arm 3' arm | ||
| 24507 | + | 133021 | 85 | 21.5 | -20.6 | 5' arm 3' arm | |||
| 24637 | - | 86447 | 90 | 21.5 | -21.4 | NP_944420 | 5' arm 3' arm | ||
| 24731 | - | 140855 | 89 | 21.5 | -22.5 | NP_944447 | 5' arm 3' arm | ||
| 24602 | - | 54964 | 87 | 21.5 | -22.2 | NP_944407 | 5' arm 3' arm | ||
| 24420 | + | 61131 | 83 | 21.5 | -20.8 | NP_944409 | 5' arm 3' arm | ||
| 24415 | + | 59841 | 90 | 21.5 | -23.9 | NP_944409 | 5' arm 3' arm | ||
| 24685 | - | 115699 | 90 | 21.5 | -23.9 | 5' arm 3' arm | |||
| 24413 | + | 58066 | 90 | 21.5 | -27 | NP_944409 | 5' arm 3' arm | ||
| 24410 | + | 56983 | 89 | 21.5 | -26.7 | NP_944409 | 5' arm 3' arm | ||
| 24621 | - | 72218 | 87 | 21.5 | -24.9 | NP_944412 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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