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| GenBank Identifier | RefSeq Acc. | Name |
| 51518014 | NC_006146.1 | Cercopithecine herpesvirus 15 |
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| ID |
strand
|
start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 28774 | + | 46171 | 88 | 20 | -29.8 | YP_067950 | 5' arm 3' arm | ||
| 28783 | + | 49675 | 71 | 20.5 | -20.9 | YP_067950 | 5' arm 3' arm | ||
| 28780 | + | 48203 | 90 | 21 | -25.9 | YP_067950 | 5' arm 3' arm | ||
| 28777 | + | 47312 | 88 | 21.5 | -23.8 | YP_067950 | 5' arm 3' arm | ||
| 28779 | + | 47717 | 90 | 22 | -23 | YP_067950 | 5' arm 3' arm | ||
| 28784 | + | 49821 | 89 | 22.5 | -31.5 | YP_067950 | 5' arm 3' arm | ||
| 28776 | + | 46715 | 90 | 22.5 | -20.9 | YP_067950 | 5' arm 3' arm | ||
| 28787 | + | 50799 | 90 | 25.5 | -31 | YP_067950 | 5' arm 3' arm | ||
| 28790 | + | 52384 | 90 | 22 | -23.7 | YP_067950 | 5' arm 3' arm | ||
| 28785 | + | 50325 | 86 | 21.5 | -23 | YP_067950 | 5' arm 3' arm | ||
| 28798 | + | 60949 | 87 | 21.5 | -21.7 | YP_067954 | 5' arm 3' arm | ||
| 28796 | + | 59129 | 87 | 21.5 | -24.3 | YP_067953 | 5' arm 3' arm | ||
| 28795 | + | 58915 | 81 | 19 | -24.9 | YP_067953 | 5' arm 3' arm | ||
| 28793 | + | 54474 | 88 | 19.5 | -22.4 | YP_067951 | 5' arm 3' arm | ||
| 28794 | + | 54690 | 90 | 21 | -22 | YP_067951 | 5' arm 3' arm | ||
| 28792 | + | 53958 | 89 | 19 | -27.3 | YP_067951 | 5' arm 3' arm | ||
| 28791 | + | 53716 | 89 | 20 | -26.2 | YP_067951 | 5' arm 3' arm | ||
| 28789 | + | 51371 | 89 | 20 | -23 | YP_067950 | 5' arm 3' arm | ||
| 28788 | + | 51281 | 89 | 20 | -23 | YP_067950 | 5' arm 3' arm | ||
| 28786 | + | 50558 | 90 | 21 | -19.7 | YP_067950 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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