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| GenBank Identifier | RefSeq Acc. | Name |
| 21716071 | NC_004065.1 | Murid herpesvirus 1 |
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| ID |
strand
|
start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 15663 | + | 2049 | 88 | 21.5 | -20.8 | 5' arm 3' arm | |||
| 15660 | + | 384 | 88 | 21.5 | -27.8 | 5' arm 3' arm | |||
| 15658 | + | 51 | 86 | 21.5 | -23.1 | 5' arm 3' arm | |||
| 15662 | + | 1787 | 88 | 23.5 | -21.7 | YP_214010 | 5' arm 3' arm | ||
| 15659 | + | 278 | 90 | 26 | -25.7 | 5' arm 3' arm | |||
| 15673 | + | 19339 | 88 | 21.5 | -20.6 | YP_214026 | 5' arm 3' arm | ||
| 15671 | + | 18554 | 90 | 21 | -37.4 | YP_214026 | 5' arm 3' arm | ||
| 15686 | + | 29471 | 89 | 19.5 | -23.5 | YP_214035 | 5' arm 3' arm | ||
| 15685 | + | 29360 | 89 | 19.5 | -20.4 | YP_214035 | 5' arm 3' arm | ||
| 15683 | + | 28489 | 90 | 19.5 | -19.5 | YP_214034 | 5' arm 3' arm | ||
| 15687 | + | 29907 | 90 | 20 | -21.2 | YP_214036 | 5' arm 3' arm | ||
| 15684 | + | 29086 | 88 | 20 | -22.9 | YP_214036 | 5' arm 3' arm | ||
| 15681 | + | 27507 | 90 | 20 | -26.5 | YP_214034 | 5' arm 3' arm | ||
| 15677 | + | 24785 | 87 | 19.5 | -26.2 | YP_214031 | 5' arm 3' arm | ||
| 15676 | + | 24066 | 87 | 20 | -20.4 | YP_214031 | 5' arm 3' arm | ||
| 15680 | + | 25904 | 90 | 21 | -21.5 | YP_214033 | 5' arm 3' arm | ||
| 15679 | + | 25571 | 87 | 21 | -25 | YP_214033 | 5' arm 3' arm | ||
| 15678 | + | 24874 | 88 | 22 | -24.5 | YP_214031 | 5' arm 3' arm | ||
| 15672 | + | 18669 | 86 | 20 | -21.9 | YP_214026 | 5' arm 3' arm | ||
| 15675 | + | 20875 | 88 | 21 | -24.2 | YP_214028 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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