miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8810	+	11883	90	19	-20	NP_061515		5' arm      3' arm
8813	+	14417	90	23.5	-24.7	NP_061518		5' arm      3' arm
8824	+	17718	90	22.5	-22.3	NP_061522		5' arm      3' arm
8818	+	16512	89	22	-24.1	NP_061522		5' arm      3' arm
8817	+	16325	84	21	-22.2	NP_061522		5' arm      3' arm
8819	+	16710	90	21	-20.4	NP_061522		5' arm      3' arm
8814	+	14899	89	20.5	-27.4	NP_061519		5' arm      3' arm
8815	+	15539	90	20.5	-27.6	NP_061521		5' arm      3' arm
8929	-	48741	87	21.5	-21.7	NP_061570		5' arm
8926	-	47422	90	20.5	-33.1	NP_061569		5' arm      3' arm
8927	-	47868	85	20	-21	NP_061569		5' arm      3' arm
8928	-	48643	90	19	-20.5	NP_061570		5' arm      3' arm
8923	-	43979	90	22.5	-21.6			5' arm
8930	-	49613	86	22	-22.3	NP_061572		5' arm      3' arm
8936	-	55393	90	19.5	-21.9	NP_061587		5' arm      3' arm
8932	-	52152	78	20	-21.7	NP_061578		5' arm      3' arm
8933	-	52979	90	20	-23.5	NP_061580		5' arm      3' arm
8935	-	53958	89	21.5	-24.1	NP_061582		5' arm      3' arm
8931	-	51838	86	22	-25.3	NP_061578		5' arm      3' arm
8876	-	129	90	21	-23.7	NP_061497		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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