miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
1367	+	22486	89	19	-23.2	NP_039695		5' arm      3' arm
1364	+	20896	83	19	-23.1			5' arm      3' arm
1354	+	16087	90	22	-20	NP_039690		5' arm      3' arm
1359	+	18381	90	20	-34.1	NP_039691		5' arm      3' arm
1356	+	16296	90	19.5	-25.7	NP_039690		5' arm      3' arm
1358	+	17452	88	19	-26	NP_039690		5' arm      3' arm
1361	+	19104	88	20.5	-19.7	NP_039691		5' arm      3' arm
1362	+	19291	90	20.5	-22.3	NP_039691		5' arm      3' arm
1363	+	19440	87	20.5	-28.7	NP_039692		5' arm      3' arm
1365	+	21200	88	20.5	-21	NP_039693		5' arm      3' arm
1366	+	21939	87	20	-19.5	NP_039695		5' arm      3' arm
1360	+	18824	89	19.5	-21.1	NP_039691		5' arm      3' arm
1517	-	43571	90	22	-24.06	NP_039733		5' arm      3' arm
1518	-	44241	79	22	-23.9	NP_039734		5' arm      3' arm
1515	-	43089	90	22.5	-24.5	NP_039733		5' arm      3' arm
1525	-	51661	87	19	-29.5			5' arm      3' arm
1524	-	51289	90	19.5	-27.4			5' arm      3' arm
1521	-	48310	87	20	-27.1	NP_039746		5' arm      3' arm
1522	-	48501	88	20.5	-19.4	NP_039746		5' arm      3' arm
1424	-	155	90	19.5	-26.7			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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