miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
16299	+	23286	90	19.5	-22.4	NP_665952		5' arm      3' arm
16309	+	29202	90	24	-34.9	NP_665959		5' arm      3' arm
16315	+	31787	83	24	-21.6			5' arm      3' arm
16306	+	28491	79	22.5	-21.1	NP_665957		5' arm      3' arm
16289	+	19030	88	20	-21.26	NP_665945		5' arm      3' arm
16288	+	18891	89	20	-25.1	NP_665945		5' arm      3' arm
16280	+	15450	89	22	-27.6	NP_665940		5' arm      3' arm
16282	+	16606	90	22	-25.5			5' arm      3' arm
16286	+	17688	84	20.5	-26.9	NP_665942		5' arm      3' arm
16285	+	17520	90	20	-21	NP_665942		5' arm      3' arm
16283	+	16699	90	19.5	-24.4			5' arm      3' arm
16281	+	16460	90	19	-25.3	NP_665940		5' arm      3' arm
16284	+	17037	80	19	-19.6	NP_665941		5' arm      3' arm
16296	+	21847	89	26	-23.7	NP_665949		5' arm      3' arm
16291	+	19567	88	21.5	-19.6	NP_665946		5' arm      3' arm
16287	+	18751	90	21	-23.6	NP_665945		5' arm      3' arm
16290	+	19384	90	21	-26.8	NP_665946		5' arm      3' arm
16292	+	20075	90	21	-22.8	NP_665947		5' arm      3' arm
16295	+	21691	87	20.5	-23.9	NP_665949		5' arm      3' arm
16369	-	1268	89	20	-20.9	NP_665920		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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