miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
18571	+	17007	81	20	-25.2			5' arm      3' arm
18575	+	18365	90	19.5	-22.3	NP_817615		5' arm      3' arm
18563	+	14097	89	19	-26.6	NP_817611		5' arm      3' arm
18565	+	15114	90	19	-23.8	NP_817612		5' arm      3' arm
18569	+	16819	83	19	-32.5	NP_817615		5' arm      3' arm
18579	+	22107	86	22	-23.6	NP_817617		5' arm      3' arm
18578	+	20883	85	21.5	-22	NP_817617		5' arm      3' arm
18740	-	41999	90	21.5	-22.9	NP_817653		5' arm      3' arm
18742	-	44743	89	20	-27.3	NP_817663		5' arm      3' arm
18741	-	43837	85	19	-22.8	NP_817661		5' arm      3' arm
18738	-	40771	90	21	-25.3	NP_817651		5' arm      3' arm
18736	-	39274	89	21	-26.8	NP_817648		5' arm      3' arm
18739	-	41816	88	24	-23.3	NP_817653		5' arm      3' arm
18749	-	50895	85	19	-20.76			5' arm      3' arm
18745	-	47013	89	19.5	-25.2	NP_817668		5' arm      3' arm
18747	-	47767	84	20	-21.5	NP_817670		5' arm      3' arm
18748	-	49664	89	20	-24.4	NP_817677		5' arm      3' arm
18746	-	47176	71	20.5	-28.02			5' arm      3' arm
18744	-	46740	90	22	-28.9	NP_817668		5' arm      3' arm
18647	-	591	90	20	-24.2	NP_817592		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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