miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
20888	-	42028	89	24	-35.5			5' arm      3' arm
20901	-	53121	90	20	-22.9	NP_818614		5' arm      3' arm
20919	-	69841	90	20	-19.5	NP_818646		5' arm
20885	-	41324	90	25.5	-29.3	NP_818594		5' arm      3' arm
20920	-	70537	89	23	-30.5			5' arm      3' arm
20864	-	25082	86	20.5	-20.1	NP_818572		5' arm      3' arm
20916	-	68087	90	19.5	-26	NP_818646		5' arm      3' arm
20865	-	26472	88	21	-21.1	NP_818573		5' arm      3' arm
20871	-	31782	89	19	-19.7	NP_818577		5' arm      3' arm
20878	-	37440	90	20.5	-23.1			5' arm      3' arm
20875	-	36485	90	22	-26.3	NP_818585		5' arm      3' arm
20884	-	41226	82	20	-20.2	NP_818594		5' arm      3' arm
20883	-	40869	90	23	-20.8	NP_818594		5' arm      3' arm
20890	-	43901	88	20	-19.5			5' arm      3' arm
20897	-	51024	87	19.5	-23.5	NP_818611		5' arm
20898	-	51496	89	22.5	-26.3	NP_818612		5' arm      3' arm
20903	-	53818	90	19	-20.5	NP_818615		5' arm      3' arm
20904	-	53976	88	21	-22.4			5' arm      3' arm
20910	-	60660	85	21	-25	NP_818625		5' arm      3' arm
20913	-	64482	88	20.5	-24.1	NP_818636		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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