miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
24917	-	11290	88	19.5	-20.3	NP_945044		5' arm      3' arm
24971	-	54551	87	19	-20.2	NP_945113		5' arm      3' arm
24961	-	47262	89	23	-29.4	NP_945099		5' arm      3' arm
24964	-	49151	90	20.5	-21.7	NP_945102		5' arm      3' arm
24957	-	45676	89	19	-26.7	NP_945097		5' arm      3' arm
24954	-	39877	89	19.5	-19.82	NP_945088		5' arm      3' arm
24915	-	10623	89	22	-30.2	NP_945044		5' arm      3' arm
24922	-	15312	90	22.5	-19.4	NP_945048		5' arm      3' arm
24931	-	21626	90	23	-29.5	NP_945055		5' arm      3' arm
24930	-	21357	90	19	-27.9	NP_945054		5' arm      3' arm
24839	+	15421	87	22	-23.3	NP_945048		5' arm      3' arm
24859	+	27494	90	20.5	-22.2	NP_945063		5' arm      3' arm
24865	+	31599	87	20.5	-21.1			5' arm      3' arm
24862	+	30680	90	20	-22.6	NP_945069		5' arm      3' arm
24867	+	32775	88	26	-24.8	NP_945073		5' arm      3' arm
24841	+	15911	90	22.5	-21.1	NP_945049		5' arm      3' arm
24828	+	11947	90	19	-21.3	NP_945044		5' arm      3' arm
24874	+	36360	88	24.5	-29.7	NP_945078		5' arm      3' arm
24864	+	31289	87	19.5	-29	NP_945069		5' arm      3' arm
24817	+	6917	90	20	-27.9	NP_945040		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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