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| GenBank Identifier | RefSeq Acc. | Name |
| 21716071 | NC_004065.1 | Murid herpesvirus 1 |
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| ID |
strand
|
start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 16193 | - | 191754 | 90 | 19.5 | -24 | YP_214137 | 5' arm 3' arm | ||
| 16187 | - | 186985 | 90 | 19.5 | -22.9 | YP_214129 | 5' arm 3' arm | ||
| 16182 | - | 183339 | 87 | 21.5 | -22.5 | YP_214126 | 5' arm 3' arm | ||
| 16177 | - | 176367 | 89 | 22 | -29.41 | YP_214122 | 5' arm 3' arm | ||
| 16173 | - | 171939 | 90 | 22 | -24.4 | YP_214114 | 5' arm 3' arm | ||
| 16169 | - | 167901 | 84 | 19 | -26.4 | YP_214111 | 5' arm 3' arm | ||
| 16167 | - | 164435 | 86 | 19 | -24.9 | 5' arm 3' arm | |||
| 16204 | - | 198447 | 89 | 20 | -23.5 | YP_214141 | 5' arm 3' arm | ||
| 16207 | - | 198913 | 85 | 20.5 | -27 | YP_214141 | 5' arm 3' arm | ||
| 16212 | - | 201912 | 82 | 24 | -21 | YP_214143 | 5' arm 3' arm | ||
| 16153 | - | 149203 | 89 | 20 | -26.12 | YP_214104 | 5' arm 3' arm | ||
| 16151 | - | 148585 | 87 | 20.5 | -26.3 | YP_214103 | 5' arm 3' arm | ||
| 16148 | - | 146951 | 90 | 19 | -32.1 | YP_214102 | 5' arm 3' arm | ||
| 16140 | - | 141608 | 90 | 20.5 | -25.6 | YP_214098 | 5' arm 3' arm | ||
| 16143 | - | 142977 | 90 | 20 | -20.6 | YP_214099 | 5' arm 3' arm | ||
| 16230 | - | 223747 | 90 | 22 | -26.9 | YP_214165 | 5' arm 3' arm | ||
| 16229 | - | 223121 | 89 | 19.5 | -25.2 | YP_214164 | 5' arm 3' arm | ||
| 16225 | - | 214276 | 85 | 20.5 | -24.8 | 5' arm 3' arm | |||
| 16217 | - | 207469 | 90 | 22.5 | -22.8 | YP_214149 | 5' arm 3' arm | ||
| 16216 | - | 207070 | 90 | 21 | -21.7 | YP_214148 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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