miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
1962	-	148739	86	26.5	-24.9	NP_783791		5' arm      3' arm
1957	-	145228	89	20	-25.3	NP_040033		5' arm      3' arm
1953	-	141166	88	20.5	-20.5	NP_783790		5' arm      3' arm
1950	-	136114	88	19	-21.9	NP_040028		5' arm      3' arm
1948	-	133248	89	19	-25.7	NP_040023		5' arm      3' arm
1997	-	177034	88	20	-22.2	NP_040067		5' arm      3' arm
2001	-	185866	90	25	-28.7			5' arm      3' arm
2055	-	229380	89	19	-19.5	NP_040085		5' arm      3' arm
2048	-	223207	89	20.5	-22.5	NP_040115		5' arm      3' arm
2042	-	221478	82	19.5	-28.5	NP_040114	hcmv-mir-US33
2040	-	220139	89	21.5	-27.6			5' arm      3' arm
2037	-	216282	88	21.5	-27.2			5' arm      3' arm
2033	-	213932	87	20	-28.4	NP_040108		5' arm      3' arm
2027	-	209428	90	24	-26.4	NP_783805		5' arm      3' arm
2025	-	207759	89	19.5	-21.7	NP_040103		5' arm      3' arm
2018	-	200801	89	21.5	-23	NP_040096		5' arm      3' arm
2020	-	201993	90	21	-22.06	NP_040097		5' arm      3' arm
2011	-	193905	88	23.5	-27.3			5' arm      3' arm
2008	-	193216	89	21.5	-20.4	NP_040085		5' arm      3' arm
2009	-	193466	90	20	-26.9	NP_783803		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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