miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
31507	+	19658	88	20	-25.3	YP_184893		5' arm      3' arm
31520	+	10946	88	20.5	-28.1			5' arm      3' arm
31518	+	5190	87	24.5	-24.3			5' arm      3' arm
31508	+	23622	90	21.5	-20.5	YP_184894		5' arm      3' arm
31513	+	14621	90	21	-20.9			5' arm      3' arm
31509	+	34142	90	26.5	-25.5			5' arm      3' arm
31484	+	667	82	20	-31			5' arm      3' arm
31425	+	5644	90	19.5	-20.5			5' arm      3' arm
31440	+	449	90	31.5	-29.9			5' arm      3' arm
31441	+	3599	79	22	-24.4			5' arm      3' arm
31444	+	5339	90	35.5	-28.5			5' arm      3' arm
31442	+	5156	89	34.5	-33.1			5' arm      3' arm
31443	+	5247	90	32.5	-22.2			5' arm      3' arm
31445	+	16367	89	23.5	-29			5' arm      3' arm
31476	+	1410	89	27	-27.5			5' arm      3' arm
31477	+	4066	89	24	-32.5			5' arm      3' arm
31479	+	6458	90	24.5	-20.62			5' arm      3' arm
31478	+	5212	85	21	-29.9			5' arm      3' arm
31480	+	20573	90	23	-33.3			5' arm      3' arm
31488	+	11127	90	23	-28.5			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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