miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
29060	-	96533	86	25	-27	YP_067978		5' arm      3' arm
29059	-	96065	89	20	-19.5	YP_067978		5' arm      3' arm
29055	-	93528	90	21	-21.1	YP_067977		5' arm      3' arm
29052	-	92739	89	19	-24.91	YP_067976		5' arm      3' arm
29046	-	85938	88	23	-21.5	YP_067970		5' arm      3' arm
29101	-	128090	89	20.5	-25.5	YP_068000		5' arm      3' arm
29104	-	129623	90	22.5	-22.2			5' arm      3' arm
29151	-	164759	90	25.5	-19.8	YP_068017		5' arm      3' arm
29149	-	162181	89	20	-34.1			5' arm      3' arm
29144	-	159728	81	19.5	-30.5	YP_068012		5' arm      3' arm
29139	-	157550	90	19.5	-26.8	YP_068012		5' arm      3' arm
29137	-	157019	87	21.5	-23.8			5' arm      3' arm
29136	-	156583	86	19	-21.3	YP_068011		5' arm      3' arm
29127	-	148701	87	20.5	-23.9	YP_068006		5' arm      3' arm
29128	-	149679	82	19	-26.5	YP_068007		5' arm      3' arm
29122	-	143643	90	24.5	-25.72			5' arm      3' arm
29119	-	142559	90	21.5	-29.4			5' arm      3' arm
29115	-	138990	90	19.5	-23.5			5' arm      3' arm
29107	-	131020	90	23	-26.6	YP_068001		5' arm      3' arm
29108	-	133188	81	20	-30			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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