miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
29135	-	156127	90	20.5	-26.3	YP_068010		5' arm      3' arm
29134	-	155528	89	19	-20	YP_068010		5' arm      3' arm
29053	-	92936	87	20	-28.41	YP_067976		5' arm      3' arm
29057	-	95575	86	19	-24.1	YP_067977		5' arm      3' arm
29062	-	97062	89	20	-22.6	YP_067978		5' arm      3' arm
29121	-	143460	90	22	-25			5' arm      3' arm
29116	-	139221	90	20	-29.5			5' arm      3' arm
29110	-	133946	89	25	-19.9			5' arm      3' arm
29112	-	134214	86	21	-23.4			5' arm      3' arm
29098	-	126276	89	23	-29.4	YP_067998		5' arm      3' arm
29097	-	126017	90	21	-22.3	YP_067998		5' arm      3' arm
29099	-	126600	90	19.5	-23.7	YP_067999		5' arm      3' arm
29091	-	120917	89	26	-31.4	YP_067995		5' arm      3' arm
29088	-	118638	90	20.5	-24.4	YP_067994		5' arm      3' arm
29087	-	115234	86	19.5	-23.3	YP_067994		5' arm      3' arm
29083	-	111639	88	20.5	-29.7	YP_067987		5' arm      3' arm
29076	-	106185	84	19.5	-21.5	YP_067986		5' arm      3' arm
29074	-	105911	90	19	-23.3	YP_067986		5' arm      3' arm
29065	-	98990	90	21	-36			5' arm      3' arm
29066	-	99651	89	19	-24.7	YP_067981		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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