miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
16267	+	9362	89	21	-21.8	NP_665931		5' arm      3' arm
16311	+	29610	90	21	-29.31	NP_665959		5' arm      3' arm
16310	+	29322	88	21.5	-20	NP_665959		5' arm      3' arm
16353	+	51126	89	19	-22.6			5' arm      3' arm
16305	+	28276	90	22	-33.3	NP_665957		5' arm      3' arm
16362	+	55300	80	20.5	-27.2	NP_666010		5' arm      3' arm
16365	+	56497	90	20.5	-23.2	NP_666012		5' arm      3' arm
16366	+	57397	90	20	-24	NP_666013		5' arm      3' arm
16361	+	54525	86	19.5	-20.3	NP_666008		5' arm      3' arm
16363	+	55470	89	25	-30.9	NP_666011		5' arm      3' arm
16367	+	57658	85	19.5	-21.7	NP_666014		5' arm      3' arm
16277	+	13297	87	19.5	-22.2	NP_665938		5' arm      3' arm
16275	+	12737	89	19.5	-27.6	NP_665936		5' arm      3' arm
16273	+	11848	89	19.5	-20	NP_665936		5' arm      3' arm
16314	+	31305	90	22	-27.4	NP_665963		5' arm      3' arm
16279	+	13797	90	19	-28.5			5' arm      3' arm
16299	+	23286	90	19.5	-22.4	NP_665952		5' arm      3' arm
16309	+	29202	90	24	-34.9	NP_665959		5' arm      3' arm
16315	+	31787	83	24	-21.6			5' arm      3' arm
16306	+	28491	79	22.5	-21.1	NP_665957		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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