miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
17974913 NC_003310.1 Monkeypox virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
12275 + 171813 87 23 -19.5 5' arm      3' arm
12276 - 54166 88 24 -24.5 NP_536484 5' arm      3' arm
12274 + 167968 90 23.5 -19.8 NP_536598 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.