miRNA display CGI


Results 1 - 19 of 19 are showing below:
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GenBank Identifier RefSeq Acc. Name
9790357 NC_001559.1 Vaccinia virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
3365 + 4765 90 19.5 -21.6 5' arm      3' arm
3371 - 9715 88 19 -21.1 5' arm      3' arm
3370 - 9464 86 21 -26.09 5' arm      3' arm
3372 - 16135 87 22.5 -24.3 5' arm      3' arm
3373 - 51328 90 21.5 -21.3 5' arm      3' arm
3374 - 57242 88 24 -24.5 5' arm      3' arm
3375 - 181391 88 20 -22.8 5' arm      3' arm
3376 - 186973 90 19.5 -21.6 5' arm      3' arm
32051 + 174530 87 23 -19.5 5' arm      3' arm
3366 + 10347 88 20 -22.8 5' arm      3' arm
3367 + 170510 90 24.5 -19.8 5' arm      3' arm
3369 + 182274 86 21 -26.09 5' arm      3' arm
3368 + 182023 88 19 -21.1 5' arm      3' arm
32049 + 4132 90 19.5 -21.6 YP_232883 5' arm      3' arm
32055 - 190580 90 19.5 -21.6 YP_232883 5' arm      3' arm
32052 - 48197 90 21.5 -21.3 YP_232941 5' arm      3' arm
32053 - 54111 88 24 -24.5 YP_232947 5' arm      3' arm
32054 - 122091 88 20 -20 YP_233012 5' arm      3' arm
32050 + 171487 90 24.5 -19.8 YP_233073 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.