miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
5777	+	148166	89	21	-36.8	NP_044676		5' arm      3' arm
5974	-	130067	89	21	-36.8	NP_044662		5' arm      3' arm
5739	+	125870	88	28.5	-35.7			5' arm      3' arm
5776	+	147656	89	22.5	-35.7	NP_044676		5' arm      3' arm
5975	-	130577	89	22.5	-35.7	NP_044676		5' arm      3' arm
5780	-	501	88	28.5	-35.7			5' arm      3' arm
5628	+	53260	87	21.5	-34.8	NP_044629		5' arm      3' arm
5704	+	98921	87	19	-33.9	NP_044648		5' arm      3' arm
5792	-	7137	89	22	-33.6			5' arm      3' arm
5727	+	119234	89	22	-33.6			5' arm      3' arm
5803	-	17209	90	23	-33.4	NP_044608		5' arm      3' arm
5788	-	4122	87	23	-33.4	NP_044601		5' arm      3' arm
5731	+	122249	87	23	-33.4	NP_044601		5' arm      3' arm
5868	-	57658	87	22.5	-33.3	NP_044630		5' arm      3' arm
5934	-	97764	85	21	-33.2	NP_044646		5' arm      3' arm
5860	-	53890	90	22.5	-33.2	NP_044629		5' arm      3' arm
5606	+	39840	89	19	-33.2	NP_044620		5' arm      3' arm
5587	+	31553	88	20.5	-32.7	NP_044618		5' arm      3' arm
5607	+	40460	89	19.5	-32.4	NP_044620		5' arm      3' arm
5937	-	102130	90	24	-32.3	NP_044649		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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