miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
5573	+	25545	90	20	-25.8	NP_044613		5' arm      3' arm
5574	+	25763	89	20.5	-24.5	NP_044613		5' arm      3' arm
5575	+	25919	90	22	-28.9	NP_044613		5' arm      3' arm
5576	+	26475	89	19.5	-22.2	NP_044613		5' arm      3' arm
5577	+	26850	89	23	-28.7			5' arm      3' arm
5578	+	27216	90	19.5	-23.5	NP_044614		5' arm      3' arm
5579	+	28248	77	19.5	-30.1	NP_044615		5' arm      3' arm
5580	+	28927	78	20	-29.4			5' arm      3' arm
5581	+	29079	87	20	-30.5	NP_044616		5' arm      3' arm
5582	+	29201	90	19.5	-22.7	NP_044616		5' arm      3' arm
5583	+	29879	90	20	-26.9	NP_044616		5' arm      3' arm
5584	+	30299	89	20.5	-28	NP_044617		5' arm      3' arm
5585	+	30601	89	21.5	-27.1	NP_044617		5' arm      3' arm
5586	+	31140	81	23	-31.7	NP_044617		5' arm      3' arm
5587	+	31553	88	20.5	-32.7	NP_044618		5' arm      3' arm
5588	+	32435	90	19.5	-26.2	NP_044618		5' arm      3' arm
5589	+	33314	89	20.5	-32.3	NP_044618		5' arm      3' arm
5590	+	33432	89	22.5	-24.3	NP_044618		5' arm      3' arm
5591	+	33542	89	20.5	-25.5			5' arm      3' arm
5592	+	34104	88	19.5	-23	NP_044616		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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