Results 1 - 20 of 421 are showing below:
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| GenBank Identifier | RefSeq Acc. | Name |
| 9629267 | NC_001798.1 | Human herpesvirus 2 |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 5393 | - | 50622 | 89 | 20 | -19.4 | NP_044494 | 5' arm 3' arm | ||
| 5414 | - | 66090 | 90 | 21 | -19.4 | 5' arm 3' arm | |||
| 5368 | - | 35001 | 90 | 24 | -19.4 | 5' arm 3' arm | |||
| 5173 | + | 47625 | 90 | 19.5 | -19.5 | NP_044492 | 5' arm 3' arm | ||
| 5279 | + | 115365 | 88 | 19 | -19.5 | NP_044525 | 5' arm 3' arm | ||
| 5154 | + | 35461 | 89 | 19 | -19.5 | NP_044487 | 5' arm 3' arm | ||
| 5204 | + | 68855 | 80 | 19.5 | -19.6 | NP_044502 | 5' arm 3' arm | ||
| 5162 | + | 41202 | 89 | 19.5 | -19.6 | NP_044489 | 5' arm 3' arm | ||
| 5335 | - | 12197 | 88 | 20.5 | -19.7 | NP_044473 | 5' arm 3' arm | ||
| 5155 | + | 36214 | 88 | 20.5 | -19.8 | 5' arm 3' arm | |||
| 5159 | + | 39484 | 87 | 20 | -19.8 | NP_044488 | 5' arm 3' arm | ||
| 5351 | - | 25581 | 90 | 20.5 | -19.8 | NP_044481 | 5' arm 3' arm | ||
| 5239 | + | 89620 | 89 | 19 | -19.9 | NP_044509 | 5' arm 3' arm | ||
| 5326 | - | 6325 | 87 | 27 | -19.9 | 5' arm 3' arm | |||
| 5287 | + | 120925 | 87 | 27 | -19.9 | 5' arm 3' arm | |||
| 5461 | - | 105575 | 89 | 21 | -20 | NP_044518 | 5' arm 3' arm | ||
| 5463 | - | 107179 | 90 | 20 | -20 | NP_044519 | 5' arm 3' arm | ||
| 5276 | + | 112392 | 90 | 23 | -20.14 | NP_044523 | 5' arm 3' arm | ||
| 5165 | + | 43702 | 87 | 21 | -20.2 | NP_044490 | 5' arm 3' arm | ||
| 5198 | + | 64673 | 86 | 19 | -20.2 | NP_044500 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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